Publications


2026

🤖 Izquierdo P, Weng X, Juenger T, Bonnette J, Yoshinaga Y, Daum C, Lipzen S, et al. (2026). Uncovering genetic mechanisms underlying trait variation in switchgrass using explainable artificial intelligence. bioRxiv.

2025

🧠 Segura K, Izquierdo P, de Los Campos G, Lehti-Shiu M, Shiu S. (2025). Predictive models of the genetic bases underlying budding yeast fitness in multiple environments. bioRxiv.
🤖 Singhal R*, Izquierdo P*, Ranaweera T, Segura K, Brown B, Lehti-Shiu M, Shiu S. (2025). Using supervised machine-learning approaches to understand abiotic stress tolerance and design resilient crops. Philosophical Transactions of the Royal Society B.
🌱 Palande S, Arsenault J, Basurto P, Bleich A, Brown B, Buysse S, Connors N, Adhikari S, Dobson K, Guerra F, Guerrero M, Harlow S, Herrera H, Hightower A, Izquierdo P, et al. (2025). Expression-based machine learning models for predicting plant tissue identity. Applications in Plant Sciences.

2024

🧬 Izquierdo P, Sadohara R, Wiesinger J, Glahn R, Urrea C, Cichy K. (2024). Genome-wide association and genomic prediction for iron and zinc concentration and iron bioavailability in a collection of yellow dry beans. Frontiers in Genetics.

2023

🌾 Amongi W, Nkalubo S, Ochwo-Ssemakula M, Badji A, Dramadri I, Odongo T, Nuwamanya E, Tukamuhabwe P, Izquierdo P, Cichy K, Kelly J, Mukankusi C. (2023). Phenotype based clustering, and diversity of common bean genotypes in seed iron concentration and cooking time. PLOS ONE.
🌾 Amongi W, Nkalubo S, Ochwo-ssemakula M, Dramadri I, Odongo T, Nuwamanya E, Tukamuhabwe P, Izquierdo P, Cichy K, Kelly J, Mukankusi C. (2023). Genetic clustering, and diversity of African panel of released common bean genotypes and breeding lines. Genetic Resources and Crop Evolution.

2022

🫘 Sadohara R, Izquierdo P, Couto Alves F, Porch T, Beaver J, Urrea C, Cichy K. (2022). The Phaseolus vulgaris L. Yellow Bean Collection: genetic diversity and characterization for cooking time. Genetic Resources and Crop Evolution.
🌈 Sadohara R, Long Y, Izquierdo P, Urrea C, Morris D, Cichy K. (2022). Seed coat color genetics and genotype × environment effects in yellow beans via machine-learning and genome-wide association. The Plant Genome.

2020

📍 Diaz S, Ariza-Suarez D, Izquierdo P, Lobaton J, de la Hoz J, Acevedo F, Duitama J, Guerrero J, Cajiao C, Mayor V, Beebe S, Raatz B. (2020). Genetic mapping for agronomic traits in a MAGIC population of common bean (Phaseolus vulgaris L.) under drought conditions. BMC Genomics.
🍲 Berry M, Izquierdo P, Jeffery H, Shaw S, Nchimbi-Msolla S, Cichy K. (2020). QTL analysis of cooking time and quality traits in dry bean (Phaseolus vulgaris L.). Theoretical and Applied Genetics.

2018

🧬 Izquierdo P, Astudillo C, Blair M, Iqbal A, Raatz B, Cichy K. (2018). Meta-QTL analysis of seed iron and zinc concentration and content in common bean (Phaseolus vulgaris L.). Theoretical and Applied Genetics.

2016

💻 Perea C, De La Hoz J, Cruz D, Lobaton J, Izquierdo P, Quintero J, Raatz B, Duitama J. (2016). Bioinformatic analysis of genotype by sequencing (GBS) data with NGSEP. BMC Genomics.

2013

🌱 Blair M, Izquierdo P, Astudillo C, Grusak M. (2013). A legume biofortification quandary: Variability and genetic control of seed coat micronutrient accumulation in common beans. Frontiers in Plant Science.
🫘 Delgado H, Pinzón E, Blair M, Izquierdo P. (2013). Evaluation of bean (Phaseolus vulgaris L.) lines result of an advanced backcross between a wild accession and Radical Cerinza. U.D.C.A Actualidad & Divulgación Científica.

2012