DNA, central dogma of biology, mitosis, meiosis, and inheritance.
Slides
Suggested reference
Allele frequencies, Hardy-Weinberg equilibrium, chi-squared test, inbreeding.
Slides
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Quantitative variation, genetic model, heritability.
Slides
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Methods for mapping QTLs, experimental results, from QTL to gene, pros and cons.
Slides
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Methods for association mapping, fixed and random variables, multiple test corrections, pros and cons.
Slides
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Framework for GS, basic concepts, training and testing populations.
Slides
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GS application, factors affecting predictive ability, GS with major QTL.
Slides
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RStudio & Data in R, data manipulation, data visualization, get help.
Simulate alleles with additive and dominant effects.
R code
Instructor
Paulo Izquierdo – Michigan State University
Email: izquier7@msu.edu
Facilitator
Karen Cichy - USDA-ARS, Michigan State University
Email: karen.cichy@usda.gov
Organizers
Clare Mukankusi - The Alliance of Bioversity and CIAT
Email: c.mukankusi@cgiar.org
Stanley Nkalubo - National Agricultural Research Organization
Email: tamusange@gmail.com